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-rw-r--r--src/lib/tng_io.c81
1 files changed, 50 insertions, 31 deletions
diff --git a/src/lib/tng_io.c b/src/lib/tng_io.c
index 28bb9e6..ecfb4c5 100644
--- a/src/lib/tng_io.c
+++ b/src/lib/tng_io.c
@@ -976,37 +976,38 @@ static tng_function_status tng_block_header_read
* @return TNG_SUCCESS (0) if successful, TNG_FAILURE (1) if a minor error
* has occurred or TNG_CRITICAL (2) if a major error has occured.
*/
-static tng_function_status tng_block_verbatim_write(tng_trajectory_t tng_data,
- tng_gen_block_t block)
-{
- if(!block->header_contents)
- {
- printf("No contents to write. %s: %d\n", __FILE__, __LINE__);
- return(TNG_FAILURE);
- }
- if(fwrite(block->header_contents, block->header_contents_size, 1,
- tng_data->output_file) != 1)
- {
- printf("Could not write all header data. %s: %d\n",
- __FILE__, __LINE__);
- return(TNG_CRITICAL);
- }
-
- if(!block->block_contents)
- {
- printf("No block data to write. %s: %d\n",
- __FILE__, __LINE__);
- return(TNG_FAILURE);
- }
- if(fwrite(block->block_contents, block->block_contents_size, 1,
- tng_data->output_file) != 1)
- {
- printf("Could not write all block data. %s: %d\n",
- __FILE__, __LINE__);
- return(TNG_CRITICAL);
- }
- return(TNG_SUCCESS);
-}
+/* Disabled until it is used.*/
+// static tng_function_status tng_block_verbatim_write(tng_trajectory_t tng_data,
+// tng_gen_block_t block)
+// {
+// if(!block->header_contents)
+// {
+// printf("No contents to write. %s: %d\n", __FILE__, __LINE__);
+// return(TNG_FAILURE);
+// }
+// if(fwrite(block->header_contents, block->header_contents_size, 1,
+// tng_data->output_file) != 1)
+// {
+// printf("Could not write all header data. %s: %d\n",
+// __FILE__, __LINE__);
+// return(TNG_CRITICAL);
+// }
+//
+// if(!block->block_contents)
+// {
+// printf("No block data to write. %s: %d\n",
+// __FILE__, __LINE__);
+// return(TNG_FAILURE);
+// }
+// if(fwrite(block->block_contents, block->block_contents_size, 1,
+// tng_data->output_file) != 1)
+// {
+// printf("Could not write all block data. %s: %d\n",
+// __FILE__, __LINE__);
+// return(TNG_CRITICAL);
+// }
+// return(TNG_SUCCESS);
+// }
/** Write the header of a data block, regardless of its type
* @param tng_data is a trajectory data container.
@@ -3952,6 +3953,7 @@ static tng_function_status tng_uncompress(tng_trajectory_t tng_data,
void *start_pos,
const unsigned long uncompressed_len)
{
+ (void)tng_data;
char *temp;
double *d_dest = 0;
float *f_dest = 0;
@@ -4049,6 +4051,7 @@ static tng_function_status tng_gzip_compress(tng_trajectory_t tng_data,
tng_gen_block_t block,
void *start_pos, const int len)
{
+ (void)tng_data;
Bytef *dest;
char *temp;
uLong max_len, stat;
@@ -5213,6 +5216,7 @@ static tng_function_status tng_allocate_data_mem
int64_t stride_length,
const int64_t n_values_per_frame)
{
+ (void)tng_data;
void **values;
int64_t i, j, size, frame_alloc;
@@ -6697,6 +6701,7 @@ tng_function_status tng_atom_name_set(tng_trajectory_t tng_data,
tng_atom_t atom,
const char *new_name)
{
+ (void)tng_data;
int len;
len = tng_min(strlen(new_name) + 1, TNG_MAX_STR_LEN);
@@ -6728,6 +6733,7 @@ tng_function_status tng_atom_type_set(tng_trajectory_t tng_data,
tng_atom_t atom,
const char *new_type)
{
+ (void)tng_data;
int len;
len = tng_min(strlen(new_type) + 1, TNG_MAX_STR_LEN);
@@ -6886,6 +6892,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_name_set
tng_molecule_t molecule,
const char *new_name)
{
+ (void)tng_data;
int len;
len = tng_min(strlen(new_name) + 1, TNG_MAX_STR_LEN);
@@ -6999,6 +7006,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_chain_find
int64_t nr,
tng_chain_t *chain)
{
+ (void)tng_data;
int i, n_chains;
n_chains = molecule->n_chains;
@@ -7088,6 +7096,7 @@ tng_function_status DECLSPECDLLEXPORT tng_chain_name_set
tng_chain_t chain,
const char *new_name)
{
+ (void)tng_data;
int len;
len = tng_min(strlen(new_name) + 1, TNG_MAX_STR_LEN);
@@ -7122,6 +7131,7 @@ tng_function_status DECLSPECDLLEXPORT tng_chain_residue_find
int64_t id,
tng_residue_t *residue)
{
+ (void)tng_data;
int i, n_residues;
n_residues = chain->n_residues;
@@ -7249,6 +7259,7 @@ tng_function_status DECLSPECDLLEXPORT tng_residue_name_set(tng_trajectory_t tng_
tng_residue_t residue,
const char *new_name)
{
+ (void)tng_data;
int len;
len = tng_min(strlen(new_name) + 1, TNG_MAX_STR_LEN);
@@ -7350,6 +7361,7 @@ tng_function_status DECLSPECDLLEXPORT tng_residue_atom_w_id_add
tng_function_status DECLSPECDLLEXPORT tng_molecule_init(const tng_trajectory_t tng_data,
tng_molecule_t molecule)
{
+ (void)tng_data;
molecule->quaternary_str = 1;
molecule->name = 0;
molecule->n_chains = 0;
@@ -7367,6 +7379,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_init(const tng_trajectory_t t
tng_function_status DECLSPECDLLEXPORT tng_molecule_destroy(const tng_trajectory_t tng_data,
tng_molecule_t molecule)
{
+ (void)tng_data;
int i;
if(molecule->name)
@@ -10048,6 +10061,7 @@ tng_function_status DECLSPECDLLEXPORT tng_frame_set_next_frame_set_file_pos_get
const tng_trajectory_frame_set_t frame_set,
int64_t *pos)
{
+ (void)tng_data;
*pos = frame_set->next_frame_set_file_pos;
return(TNG_SUCCESS);
@@ -10058,6 +10072,7 @@ tng_function_status DECLSPECDLLEXPORT tng_frame_set_prev_frame_set_file_pos_get
const tng_trajectory_frame_set_t frame_set,
int64_t *pos)
{
+ (void)tng_data;
*pos = frame_set->prev_frame_set_file_pos;
return(TNG_SUCCESS);
@@ -10069,6 +10084,7 @@ tng_function_status DECLSPECDLLEXPORT tng_frame_set_frame_range_get
int64_t *first_frame,
int64_t *last_frame)
{
+ (void)tng_data;
*first_frame = frame_set->first_frame;
*last_frame = *first_frame + frame_set->n_frames - 1;
@@ -11970,6 +11986,7 @@ tng_function_status DECLSPECDLLEXPORT tng_data_values_free
const int64_t n_values_per_frame,
const char type)
{
+ (void)tng_data;
int i, j;
if(values)
@@ -12074,6 +12091,7 @@ tng_function_status DECLSPECDLLEXPORT tng_particle_data_values_free
const int64_t n_values_per_frame,
const char type)
{
+ (void)tng_data;
int i, j, k;
if(values)
@@ -13543,6 +13561,7 @@ tng_function_status DECLSPECDLLEXPORT tng_util_molecule_particles_get
char ***chain_names,
int64_t **chain_ids)
{
+ (void)tng_data;
tng_atom_t atom;
tng_residue_t res;
tng_chain_t chain;
contact: Jan Huwald // Impressum