diff options
Diffstat (limited to 'src')
| -rw-r--r-- | src/lib/tng_io.c | 74 |
1 files changed, 37 insertions, 37 deletions
diff --git a/src/lib/tng_io.c b/src/lib/tng_io.c index 0bd0417..ad77a16 100644 --- a/src/lib/tng_io.c +++ b/src/lib/tng_io.c @@ -3051,7 +3051,7 @@ static tng_function_status tng_molecules_block_read sizeof(struct tng_molecule)); if(!tng_data->molecules) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", tng_data->n_molecules * sizeof(struct tng_molecule), __FILE__, __LINE__); return(TNG_CRITICAL); @@ -3067,7 +3067,7 @@ static tng_function_status tng_molecules_block_read tng_data->n_molecules); if(!tng_data->molecule_cnt_list) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", tng_data->n_molecules * sizeof(struct tng_molecule), __FILE__, __LINE__); return(TNG_CRITICAL); @@ -3172,7 +3172,7 @@ static tng_function_status tng_molecules_block_read sizeof(struct tng_chain)); if(!molecule->chains) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", molecule->n_chains * sizeof(struct tng_chain), __FILE__, __LINE__); return(TNG_CRITICAL); @@ -3191,7 +3191,7 @@ static tng_function_status tng_molecules_block_read sizeof(struct tng_residue)); if(!molecule->residues) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", molecule->n_residues * sizeof(struct tng_residue), __FILE__, __LINE__); if(molecule->chains) @@ -3213,7 +3213,7 @@ static tng_function_status tng_molecules_block_read sizeof(struct tng_atom)); if(!molecule->atoms) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", molecule->n_atoms * sizeof(struct tng_atom), __FILE__, __LINE__); if(molecule->chains) @@ -3338,7 +3338,7 @@ static tng_function_status tng_molecules_block_read sizeof(struct tng_bond)); if(!molecule->bonds) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", molecule->n_bonds * sizeof(struct tng_bond), __FILE__, __LINE__); if(molecule->chains) @@ -3807,7 +3807,7 @@ static tng_function_status tng_frame_set_block_read if(!frame_set->molecule_cnt_list) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(int64_t) * tng_data->n_molecules, __FILE__, __LINE__); return(TNG_CRITICAL); @@ -4035,7 +4035,7 @@ static tng_function_status tng_frame_set_block_write temp_name = realloc(block->name, name_len + 1); if(!temp_name) { - fprintf(stderr, "TNG library: Cannot allocate memory (%d bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%u bytes). %s: %d\n", name_len+1, __FILE__, __LINE__); free(block->name); block->name = 0; @@ -4304,7 +4304,7 @@ static tng_function_status tng_trajectory_mapping_block_read sizeof(int64_t)); if(!mapping->real_particle_numbers) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", mapping->n_particles * sizeof(int64_t), __FILE__, __LINE__); return(TNG_CRITICAL); } @@ -4428,7 +4428,7 @@ static tng_function_status tng_trajectory_mapping_block_write temp_name = realloc(block->name, name_len + 1); if(!temp_name) { - fprintf(stderr, "TNG library: Cannot allocate memory (%d bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%u bytes). %s: %d\n", name_len+1, __FILE__, __LINE__); free(block->name); block->name = 0; @@ -5011,7 +5011,7 @@ static tng_function_status tng_gzip_compress(tng_trajectory_t tng_data, dest = malloc(max_len); if(!dest) { - fprintf(stderr, "TNG library: Cannot allocate memory (%ld bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%lu bytes). %s: %d\n", max_len, __FILE__, __LINE__); return(TNG_CRITICAL); } @@ -5153,7 +5153,7 @@ static tng_function_status tng_allocate_particle_data_mem n_particles); if(!data->strings[i]) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(union data_values *) * n_particles, __FILE__, __LINE__); return(TNG_CRITICAL); @@ -5164,7 +5164,7 @@ static tng_function_status tng_allocate_particle_data_mem n_values_per_frame); if(!data->strings[i][j]) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(union data_values) * n_values_per_frame, __FILE__, __LINE__); return(TNG_CRITICAL); @@ -6798,7 +6798,7 @@ static tng_function_status tng_data_block_write(tng_trajectory_t tng_data, temp_name = realloc(block->name, len); if(!temp_name) { - fprintf(stderr, "TNG library: Cannot allocate memory (%d bytes). %s: %d\n", len+1, + fprintf(stderr, "TNG library: Cannot allocate memory (%u bytes). %s: %d\n", len+1, __FILE__, __LINE__); free(block->name); block->name = 0; @@ -7976,7 +7976,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_w_id_add if(!new_molecules) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(struct tng_molecule) * (tng_data->n_molecules + 1), __FILE__, __LINE__); free(tng_data->molecules); @@ -7990,7 +7990,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_w_id_add if(!new_molecule_cnt_list) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(int64_t) * (tng_data->n_molecules + 1), __FILE__, __LINE__); free(tng_data->molecule_cnt_list); @@ -8042,7 +8042,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_existing_add if(!new_molecules) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(struct tng_molecule) * (tng_data->n_molecules + 1), __FILE__, __LINE__); free(tng_data->molecules); @@ -8056,7 +8056,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_existing_add if(!new_molecule_cnt_list) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(int64_t) * (tng_data->n_molecules + 1), __FILE__, __LINE__); free(tng_data->molecule_cnt_list); @@ -8287,7 +8287,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_system_copy(tng_trajectory_t sizeof(struct tng_molecule) * tng_data_src->n_molecules); if(!molecule_temp) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(struct tng_molecule) * tng_data_src->n_molecules, __FILE__, __LINE__); free(tng_data_dest->molecules); @@ -8298,7 +8298,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_system_copy(tng_trajectory_t sizeof(int64_t) * tng_data_src->n_molecules); if(!list_temp) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(int64_t) * tng_data_src->n_molecules, __FILE__, __LINE__); free(tng_data_dest->molecule_cnt_list); @@ -8368,7 +8368,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_system_copy(tng_trajectory_t molecule->n_bonds); if(!bond_temp) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(struct tng_bond) * molecule->n_bonds, __FILE__, __LINE__); free(molecule_temp->bonds); @@ -8568,7 +8568,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_chain_w_id_add if(!new_chains) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(struct tng_chain) * (molecule->n_chains + 1), __FILE__, __LINE__); free(molecule->chains); @@ -8609,7 +8609,7 @@ tng_function_status DECLSPECDLLEXPORT tng_molecule_bond_add if(!new_bonds) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(struct tng_bond) * (molecule->n_bonds + 1), __FILE__, __LINE__); *bond = 0; @@ -8834,7 +8834,7 @@ tng_function_status DECLSPECDLLEXPORT tng_chain_residue_w_id_add if(!new_residues) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(struct tng_residue) * (molecule->n_residues + 1), __FILE__, __LINE__); free(molecule->residues); @@ -9046,7 +9046,7 @@ tng_function_status DECLSPECDLLEXPORT tng_residue_atom_w_id_add if(!new_atoms) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(struct tng_atom) * (molecule->n_atoms + 1), __FILE__, __LINE__); free(molecule->atoms); @@ -9310,14 +9310,14 @@ tng_function_status DECLSPECDLLEXPORT tng_molsystem_bonds_get *from_atoms = malloc(sizeof(int64_t) * (*n_bonds)); if(!*from_atoms) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(int64_t) * (*n_bonds), __FILE__, __LINE__); return(TNG_CRITICAL); } *to_atoms = malloc(sizeof(int64_t) * (*n_bonds)); if(!*to_atoms) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(int64_t) * (*n_bonds), __FILE__, __LINE__); free(*from_atoms); *from_atoms = 0; @@ -9699,7 +9699,7 @@ tng_function_status DECLSPECDLLEXPORT tng_particle_mapping_add if(!mapping) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(struct tng_particle_mapping)*frame_set->n_mapping_blocks, __FILE__, __LINE__); free(frame_set->mappings); @@ -9714,7 +9714,7 @@ tng_function_status DECLSPECDLLEXPORT tng_particle_mapping_add frame_set->mappings[frame_set->n_mapping_blocks - 1].real_particle_numbers = malloc(sizeof(int64_t) * n_particles); if(!frame_set->mappings[frame_set->n_mapping_blocks - 1].real_particle_numbers) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(int64_t) * n_particles, __FILE__, __LINE__); return(TNG_CRITICAL); } @@ -15165,7 +15165,7 @@ static tng_function_status tng_data_values_alloc *values = malloc(sizeof(union data_values *) * n_frames); if(!*values) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(union data_values **) * n_frames, __FILE__, __LINE__); return(TNG_CRITICAL); @@ -15178,7 +15178,7 @@ static tng_function_status tng_data_values_alloc n_values_per_frame); if(!(*values)[i]) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(union data_values) * n_values_per_frame, __FILE__, __LINE__); free(values); @@ -15259,7 +15259,7 @@ static tng_function_status tng_particle_data_values_alloc *values = malloc(sizeof(union data_values **) * n_frames); if(!*values) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(union data_values **) * n_frames, __FILE__, __LINE__); return(TNG_CRITICAL); @@ -15272,7 +15272,7 @@ static tng_function_status tng_particle_data_values_alloc n_particles); if(!(*values)[i]) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(union data_values *) * n_particles, __FILE__, __LINE__); free(*values); @@ -15285,7 +15285,7 @@ static tng_function_status tng_particle_data_values_alloc n_values_per_frame); if(!(*values)[i][j]) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(union data_values *) * n_particles, __FILE__, __LINE__); tng_particle_data_values_free(tng_data, *values, n_frames, @@ -19226,7 +19226,7 @@ tng_function_status DECLSPECDLLEXPORT tng_util_trajectory_next_frame_present_dat temp = realloc(*data_block_ids_in_next_frame, size); if(!temp) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(int64_t) * (*n_data_blocks_in_next_frame), __FILE__, __LINE__); free(*data_block_ids_in_next_frame); @@ -19368,7 +19368,7 @@ tng_function_status DECLSPECDLLEXPORT tng_util_trajectory_next_frame_present_dat temp = realloc(*data_block_ids_in_next_frame, size); if(!temp) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(int64_t) * (*n_data_blocks_in_next_frame), __FILE__, __LINE__); free(*data_block_ids_in_next_frame); @@ -19455,7 +19455,7 @@ tng_function_status DECLSPECDLLEXPORT tng_util_trajectory_next_frame_present_dat temp = realloc(*data_block_ids_in_next_frame, size); if(!temp) { - fprintf(stderr, "TNG library: Cannot allocate memory (%"PRId64" bytes). %s: %d\n", + fprintf(stderr, "TNG library: Cannot allocate memory (%"PRIu64" bytes). %s: %d\n", sizeof(int64_t) * (*n_data_blocks_in_next_frame), __FILE__, __LINE__); free(*data_block_ids_in_next_frame); |