* a simulator run
  1. make sim/$model/$seed/.$time.simulate .. does
     1. make simulator
     2. convert_topology < topo
     3. bootstrap [seed]
     4. run <time>
  2. post-process using
     * [coarse_]replay $property $from $until $dt
     * track-coherency
  3. analyze, using
     * get <var> <id|id-range> <time>
     * plot <var> <id|id-range> <time-range>

* creating the topology
  TODO (copy from fasimu)
* sampling
  TODO (automatize simulator run, collect results)